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Data Set Group2: NIA Aging BXD CD+HFD Liver RNA-Seq (Aug18) Log2 modify this page

Data Set: NIA Aging BXD HFD Liver RNA-Seq (Aug18) Log2 modify this page
GN Accession: GN855
GEO Series: No Geo Series
Title: Transitional Systems Genetics of Mitochondria, Metabolism, and Aging
Organism: Mouse (Mus musculus, mm10)
Group: BXD
Tissue: Liver mRNA
Dataset Status: Private
Platforms: SOLID-BasicGencode-Ensembl82-2015-10-02.bed
Normalization: RNA-seq
Contact Information
Robert Williams
University of Tennessee Health Science Center
71 S Manassas St, Room 405 TSRB
Memphis, TN 38163 USA
Tel. 901 448-7050
rwilliams@uthsc.edu
Website
Download datasets and supplementary data files

Specifics of this Data Set:
HFD High fat diet.

Summary:

Impact of diet and genetics on survival in BXD GRP. Overall, on a population level of 84 unique BXD strains (666 mice on CD and 688 on HFD) when all strains were averaged the CD cohort lived significantly longer than the HFD cohort if genetics is not considered. (This dataset still unpublished). For more information or for access to this dataset please contact the person in the contact list above.



About the cases used to generate this set of data:


About the tissue used to generate this set of data:


About the array platform:


About data values and data processing:


Notes:


Experiment Type:


Contributor:


Citation:


Data source acknowledgment:


Study Id:
280
CITG Web services initiated January, 1994 as Portable Dictionary of the Mouse Genome; June 15, 2001 as WebQTL; and Jan 5, 2005 as GeneNetwork. This site is currently operated by Rob Williams, Pjotr Prins, Zachary Sloan, Arthur Centeno. Design and code by Pjotr Prins, Zach Sloan, Arthur Centeno, Danny Arends, Christian Fischer, Sam Ockman, Lei Yan, Xiaodong Zhou, Christian Fernandez, Ning Liu, Rudi Alberts, Elissa Chesler, Sujoy Roy, Evan G. Williams, Alexander G. Williams, Kenneth Manly, Jintao Wang, and Robert W. Williams, colleagues. Python Powered Registered with Nif
GeneNetwork support from:
  • The UT Center for Integrative and Translational Genomics
  • NIGMS Systems Genetics and Precision Medicine project (R01 GM123489, 2017-2021)
  • NIDA NIDA Core Center of Excellence in Transcriptomics, Systems Genetics, and the Addictome (P30 DA044223, 2017-2022)
  • NIA Translational Systems Genetics of Mitochondria, Metabolism, and Aging (R01AG043930, 2013-2018)
  • NIAAA Integrative Neuroscience Initiative on Alcoholism (U01 AA016662, U01 AA013499, U24 AA013513, U01 AA014425, 2006-2017)
  • NIDA, NIMH, and NIAAA (P20-DA 21131, 2001-2012)
  • NCI MMHCC (U01CA105417), NCRR, BIRN, (U24 RR021760)
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